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Ecosystem models

We developed simulation models for the Tasman and Golden Bays marine ecosystem to test what is likely to happen in different scenarios.

Project LeaderDurationBudget
Ian Tuck (NIWA)May 2016 – December 2019$1,495,000

Overview

We have put together and validated an ecosystem model using the Atlantis framework. The Atlantis model is a computer representation of the Tasman and Golden Bays area that can be used to mimic, and help understand, dynamics and flow-on effects from changes in the environment or its management. It encompasses everything from sunlight and nutrients through to predators and fisheries. It allows researchers and decision-makers to test different scenarios to understand effects on the whole ecosystem. 

We have engaged with regional council representatives, Māori, marine managers, and a range of stakeholders, to understand their concerns relating to the marine environment in Tasman and Golden Bays. The model has been used to explore the implications of a range of environmental and management scenarios. For example, our results suggest that the collapse of scallop populations in the region is not associated with scallop harvesting, but changes in habitat suitability.

We have also built a food-web model and have developed a size-based ecosystem model for exploring scenarios. We investigated ways to compare these modelling approaches and explored which are the most useful to answer specific questions.

This work is strongly linked with the Participatory Tools project which is developing web-based tools so people can interface with model outputs to support decision-making.

Related News

Project proposal

762 KB | pdf

Location

This is a national project.

Tools & Resources

This project has produced or contributed to:

Calibrating process-based marine ecosystem models: An example case using Atlantis
Academic publication
Pethybridge HR, Weijerman M, Perrymann H, Audzijonyte A, Porobic J, McGregor V, Girardin R, Bulman C, Ortega-Cisneros K and Sinerchia M (2019) Ecological Modelling, Elsevier, vol. 412(C)
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Creating functional groups of marine fish from categorical traits
Academic publication
Ladds MA, Sibanda N, Arnold R, Dunn MR (2018) PeerJ 6:e5795
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Atlantis model: Tasman and Golden Bays
Model
Atlantis is an 'end-to-end' ecosystem modelling tool; it encompasses everything from sunlight and nutrients through to predators and fisheries. It can be used to explore different management scenarios.
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Which ecosystem model works best for what you need?
Presentation
Webinar presentation by Vidette McGregor, Samik Datta and Adele Dutilloy; March 2020 (40 min + Q&A)
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From data compilation to model validation: a comprehensive analysis of a full deep-sea ecosystem model of the Chatham Rise
Academic publication
McGregor VL, Horn PL, Fulton EA, Dunn MR. 2019. PeerJ 7:e6517
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Spawning stock recruitment creates misleading dynamics under predation release in ecosystem and multi-species models
Academic publication
McGregor VL, Fulton EA, Dunn MR. 2019. PeerJ 7:e7308
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Addressing initialisation uncertainty for end-to-end ecosystem models: application to the Chatham Rise Atlantis model
Academic publication
McGregor VL, Fulton EA, Dunn MR. 2020. PeerJ 8:e9254
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Relationship between morphometrics and trophic levels in deep-sea fishes
Academic publication
Pinkerton M, Jones E, Leonardo D, & Dunn MR. (2020). Marine Ecology Progress Series. 637.10.3354/meps13243.
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From data compilation to model validation: comparing three ecosystem models of the Tasman and Golden Bays, New Zealand
Academic publication
McGregor VL, Horn P, Dutilloy A, Datta S, Rogers A, Porobic J, Dunn A, Tuck I (2021). PeerJ 9:e11712
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